The effects of multiple features of alternatively spliced exons on the KA/KS ratio test

Feng-Chi Chen and Trees-Juen Chuang*

Genomics Research Center, Academia Sinica, Taipei 11529, Taiwan

* Corresponding author.

E-MAIL trees@gate.sinica.edu.tw


　

Contact: Dr.Trees-Juen Chuang 

Genomics Research Center, Academia Sinica, Taipei 11529, Taiwan

Human-mouse orthologous exon pairs and the related analysis results:

Datasets used in the study Data resources
All applicable ACEs; extracted from EBI-ASD database; Human: based on Ensembl 27.35a.1 (Human Release 2); Mouse: based on Ensembl 27.33c.1 (Mouse Release 2)

CSEs;

ASEs (major-form exons); and

ASEs (non-major exons)

 extracted from the ASAP database; Using Exon_Table (downloaded from ASAP),  genomic sequences (including exons and introns) can be extracted from Genomic_Table (downloaded from ASAP). For the ASAP database, please see Reference [Nucleic Acids Research, 2003, 31(1), 101-105] for details.

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