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Data Download:

(All files were compressed by the .rar compresses format.)

(1) Highly linked exonic SNP pairs (HL-eSNP pairs)

(2) LDGN gene pairs

(3) LDGN nodes (genes) including the degree and betweenness values

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Gene interactions inferred from haplotype data
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Feng-Chi Chen1*, Yen-Zho Chen2, Yao-Ting Huang3, and Trees-Juen Chuang2,*

 1Division of Biostatistics and Bioinformatics, National Health Research Institutes, Miaoli County 350, Taiwan

2Genomics Research Center, Academia Sinica, Taipei 11529, Taiwan

3Department of Computer Science and Information Engineering, National Chung Cheng University, Chia-yi County 600, Taiwan

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 * Corresponding authors.

E-mail: trees@gate.sinica.edu.tw; fax: (886) 2-27898757; fcchen@nhri.org.tw

 Contact: Dr. Trees-Juen Chuang  

Genomics Research Center, Academia Sinica, Taipei 11529, Taiwan

Acknowledgments: This work is supported by the Genomics Research Center, Academia Sinica, Taiwan; the National Health Research Institutes (NHRI), Taiwan (under contract NHRI-EX98-9408PC); National Science Council, Taiwan (under contract NSC 96-2628-B-001-005-MY3) (above to TJC); and NHRI intramural funding (to FCC).

The homepage is maintained by Ms. Min_Chin Hsu

Last update: October 28, 2010

Related web sites:

Ensembl genome browser

HapMap

Human co-expression interactions (TMM)

DAVID knowledgebase

Human protein-protein interactions (PPI):

(1) HPRD; (2) DIP; (3)  MINT; (4) IntAct; (5) REACTOME; (6) BioGRID; (7) MIPS

Phenotype data:

(1) MGI;  (2) Human Phenotype Ontology

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