| Faculty | ||
| Core Faculty - Advisory Committee | ||
Eligible to take student(s): |
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| Institute of Biological Chemistry 中央研究院 生物化學研究所 | ||
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|
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Dr. James C. Liao
廖俊智院長
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| liaoj@gate.sinica.edu.tw | ||
Students: David Nicola Streuli.png){kind=small} |
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| Professor Liao is a world leader in metabolic and synthetic biology, particularly in the area of microbial synthesis of fuels and chemicals, and in the redesign of primary metabolic network. He also developed Network Component Analysis (NCA) and Ensemble Modeling for analyzing transcription regulatory networks, and designed synthetic (artificial) gene-metabolic regulatory circuits, which set the foundation for metabolic synthetic biology. | ||
| Biodiversity Research Center 中央研究院 生物多樣性研究中心 | ||
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Dr. Wen-Hsiung Li
李文雄
|
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| whli@sinica.edu.tw | ||
|
Students: |
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| ● Evolutionary genomics
● Molecular evolution ● Bioinformatics and computational biology ● Population genetics, human genetics |
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| Core Faculty – Division of Mathematics and Physical Sciences, Academia Sinica 中央研究院數理科學組 | ||
| Institute of Information Science 中央研究院資訊科學研究所 | ||
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Dr. Huai-Kuang Tsai
蔡懷寬
|
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| hktsai@iis.sinica.edu.tw | ||
|
Students: Yu-Hsin Chen, Shang-Kok Ng |
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| ● Evolutionary algorithm
● Bioinformatics ● Regulatory mechanism ● Metagenomics |
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| Institute of Information Science 中央研究院資訊科學研究所 | ||
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|
Dr. Ting-Yi Sung
宋定懿
|
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| tsung@iis.sinica.edu.tw | ||
|
Students:
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| ● Graph algorithms
● Interconnection networks for parallel and distributed systems ● Bioinformatics with focus on proteomics studies ● Mathematical programming |
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| Institute of Statistical Science 中央研究院 統計科學研究所 | ||
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|
Dr. Grace S. Shieh
謝叔蓉
|
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| gshieh@stat.sinica.edu.tw | ||
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Students:
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| ● Analysis of next generation sequencing data (e.g. ChIP-seq) and genomics data
● Using genetic interactions to develop cancer therapeutics ● Constructing gene networks/predicting pathway components |
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| Institute of Statistical Science 中央研究院 統計科學研究所 | ||
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|
Dr. Hsin-Chou Yang
楊欣洲
|
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| hsinchou@stat.sinica.edu.tw | ||
|
Students:
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| ● Statistical genetics/genomics
● Disease gene mapping ● Population genomics ● Omics data analysis |
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| Institute of Statistical Science 中央研究院 統計科學研究所 | ||
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|
Dr. Shin-Sheng Yuan
袁新盛
|
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| syuan@stat.sinica.edu.tw | ||
|
Students: |
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| ● Microarray data analysis
● Drug response mechanism ● Medical imaging data analysis ● Manipulating mass spectra database |
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| Institute of Statistical Science 中央研究院 統計科學研究所 | ||
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|
Dr. Wei-chung Liu
劉維中
|
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| wliu1975@stat.sinica.edu.tw | ||
|
Students: |
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| ● Mathematical biology
● Theoretical ecology ● Quantitative epidemiology ● Network biology ● Sociology ● Systems biology |
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| Institute of Statistical Science 中央研究院 統計科學研究所 | ||
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|
Dr. Chen-Hsiang Yeang
楊振翔
|
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| chyeang@stat.sinica.edu.tw | ||
|
Students:
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| ● Cancer genomics
● Molecular evolution |
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| Institute of Statistical Science 中央研究院 統計科學研究所 | ||
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|
Dr. Hsuan-Yu Chen
陳璿宇
|
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| hychen@stat.sinica.edu.tw | ||
|
Students: Rodrigo Espinoza Silva
|
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| ● Bioinformatics
● Epidemiology and biostatistic ● Integrative cancer biology ● Personalized medicine |
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| Institute of Statistical Science 中央研究院 統計科學研究所 | ||
|
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|
Dr. Yen-Tsung Huang
黃彥棕
|
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| ythuang@stat.sinica.edu.tw | ||
|
Students: Jia-Ying Su
|
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| ● Biostatistics
● Statistical Genetics ● Integrative Genomics ● Causal Mediation model ● Survival Analysis ● Epidemiology ● Causal Inference |
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| Research Center for Applied Sciences 中央研究院 應用科學研究中心 | ||
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|
Dr. Jung-Hsin Lin
林榮信
|
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| jlin@ntu.edu.tw | ||
|
Students: |
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| ● Pharmacoinformatics
● Computational biophysics ● Bioinformatics ● Structural biology ● Molecular simulations |
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| Institute of Chemistry 中央研究院 化學研究所 | ||
|
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|
Dr. Chao-Ping Hsu
許昭萍
|
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| cherri@chem.sinica.edu.tw | ||
|
Students:
|
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| ● Charge transport and energy transfer in advanced materials
● Dynamic description of biological systems |
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| Research Center for Information Technology Innovation中央研究院 資訊科技創新研究中心 | ||
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|
Dr. Yu Tsao
曹昱
|
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| yu.tsao@citi.sinica.edu.tw | ||
|
Students: |
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| ● Assisitve Speech Communication Technologies
● Audio-coding ● Deep Neural Networks ● Biomedical Signal Processing ● Speech Signal Processing |
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| Core Faculty – Division of Life Sciences, Academia Sinica 中央研究院生命科學組 | ||
| Biodiversity Research Center 中央研究院 生物多樣性研究中心 | ||
|
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|
Dr. Sen-Lin Tang
湯森林
|
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| sltang@gate.sinica.edu.tw | ||
|
Students:
|
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| ● Microbial Ecology and diversity
● Microbial genomics (Metagenomics0 ● Computational biology |
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| Biodiversity Research Center 中央研究院 生物多樣性研究中心 | ||
|
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|
Dr. John Wang
王忠信
|
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| johnwang@gate.sinica.edu.tw | ||
|
Students: |
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| ● Genetics, genomics, behavior, and evolution of social insects.
● Evolution of genome size in nematodes. |
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| Biodiversity Research Center 中央研究院 生物多樣性研究中心 | ||
|
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|
Dr. Isheng Jason Tsai
蔡怡陞
|
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| ijtsai@gate.sinica.edu.tw | ||
|
Students:
|
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| ● Comparative and population genomics
● Evolution of parasitism and pathogenicity ● Eukaryotic microbe (fungi and helminths) ecology and biodiversity |
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| Genomics Research Center 中央研究院 基因體研究中心 | ||
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|
Dr. Trees-Juen Chuang
莊樹諄
|
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| trees@gate.sinica.edu.tw | ||
|
Students:
|
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| ● Bioinformatics and Computational Biology
● Comparative & evolutionary genomics post-transcriptional modification ● Systems biology ● Primate evolution ● Genome annotation |
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| Institute of Plant and Microbial Biology 中央研究院 植物暨微生物學研究所 | ||
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|
Dr. Pao-Yang Chen
陳柏仰
|
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| paoyang@gate.sinica.edu.tw | ||
| Students: Yu-Chun Huang | ||
| ● Next generation genetics
● DNA methylation in plants ● DNA methylation landscape in plants, animals, and human |
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| Institute of Plant and Microbial Biology 中央研究院 植物暨微生物學研究所 | ||
|
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|
Dr. Chuan Ku
顧銓
|
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| chuanku@gate.sinica.edu.tw | ||
|
Students:
|
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| ● Genome evolution and regulation
● Algae and giant viruses ● Ancient evolution ● Microbial interactions and ecology ● Single-cell omics |
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| Institute of Plant and Microbial Biology 中央研究院 植物暨微生物學研究所 | ||
|
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|
Dr. Ting-Ying Wu
吳亭穎
|
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| tingying@gate.sinica.edu.tw | ||
| Students: | ||
| ● Plant systems biology
● Multi-omics analysis ● Predictive biology ● Evolution of heat and drought stress |
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| Agricultural Biotechnology Research Center 中央研究院農業生物科技研究中心 | ||
|
|
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|
Dr. Ho-Ming Chen
陳荷明
|
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| homing@gate.sinica.edu.tw | ||
|
Students: Tzu-Hsiang Lin
|
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| ● Small RNA function
● Genome of non-model organism |
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| Institute of Molecular Biology 中央研究院 分子生物研究所 | ||
|
|
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|
Dr. Chien-Ling Lin
林倩伶
|
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| mbcllin@gate.sinica.edu.tw | ||
|
Students:
|
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| ● High-throughput experimental and computational analysis of pre-mRNA splicing regulation
● Post-transcriptional mis-regulation in diseases ● Molecular and biochemical analysis of pre-mRNA splicing and translational control |
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| Institute of Molecular Biology 中央研究院 分子生物研究所 | ||
|
|
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|
Dr. Sheng-Hong Chen
陳昇宏
|
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| shengchen@gate.sinica.edu.tw | ||
|
Students: |
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| ● Single-cell systems biology
● Signaling dynamics ● Cancer genomics ● Drug combination design |
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| Core Faculty in Collaborative Universities | ||
| Institute of Bioinformatics and Structural Biology, National Tsing Hua University 國立清華大學 生物資訊與結構生物研究所 |
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|
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|
Dr. Lee-Wei Yang
楊立威
|
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| lwyang@life.nthu.edu.tw | ||
|
Students:
|
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| ● Molecular Modeling
● Theoretical Biophysics ● Structural Bioinformatics |
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| Institute of Bioinformatics and Structural Biology, National Tsing Hua University 國立清華大學 生物資訊與結構生物研究所 |
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|
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|
Dr. Hsiao-Han Chang
張筱涵
|
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| hhchang@life.nthu.edu.tw | ||
|
Students: Daniel Garcia-Ruiz
|
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| ● Genomics
● Pathogen evolution ● Computational Biology |
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| Institute of Statistics, National Yang Ming Chiao Tung University 國立陽明交通大學 統計學研究所 |
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|
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|
Dr. Henry Horng-Shing Lu
盧鴻興
|
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| henryhslu@nycu.edu.tw | ||
| Students: | ||
| ● Scientific computing
● Image science ● Bioinformatics |
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| Institute of Bioinformatics and Systems Biology, National Yang Ming Chiao Tung University 國立陽明交通大學 生物資訊及系統生物研究所 |
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|
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|
Dr. Jinn-Moon Yang
楊進木
|
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| moon@faculty.nctu.edu.tw | ||
|
Students: |
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| ● Bioinformatics systems biology
● Drug design ● Systems biology |
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| Institute of Bioinformatics and Systems Biology, National Yang Ming Chiao Tung University 國立陽明交通大學 生物資訊及系統生物研究所 |
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|
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|
Dr. Jhih-Wei Chu
朱智瑋
|
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| jwchu@nctu.edu.tw | ||
|
Students:
|
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| ● Biosystems simulation
● Multiscale modeling theory ● Protein conformational changes and alloetery ● Drug discovery and development ● Molecular kinetics |
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| Institute of Bioinformatics and Systems Biology, National Yang Ming Chiao Tung University 國立陽明交通大學 生物資訊及系統生物研究所 |
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|
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|
Dr. Tai-Ming Ko
柯泰名
|
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| taiming23@gmail.com | ||
|
Students: Po-Yuan Chen
|
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| ● Single cell sequencing
● Nano-pore sequencing ● Immunogenomics ● Pharmacogenomics |
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| Institute of BioMedical Informatics, National Yang Ming Chiao Tung University 國立陽明交通大學 生物醫學資訊研究所 |
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|
Dr. Hsuan-Cheng Huang
黃宣誠
|
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| hsuancheng@nycu.edu.tw | ||
|
Students: Ping-Yun Ou
|
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| ● Networks biology
● Systems biology ● Bioinformatics |
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| Institute of BioMedical Informatics, National Yang Ming Chiao Tung University 國立陽明交通大學 生物醫學資訊研究所 |
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|
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|
Dr. Chen-Ching Lin
林振慶
|
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| chenching.lin@nycu.edu.tw | ||
|
Students: |
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| ● Network Biology
● Computational Biology ● Bioinformatics |
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| Institute of BioMedical Informatics, National Yang Ming Chiao Tung University 國立陽明交通大學 生物醫學資訊研究所 |
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|
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|
Dr. Yen-Hua Huang
黃彥華
|
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| yhhuang@nycu.edu.tw | ||
| Students: | ||
| ● NGS data analysis and integrated interpretation (e.g. integration with heterogeneous data sources)
● Annotation of new genomes and comparative genomics based data mining ● Human gene expression profile analysis and regulatory circuit reconstruction |
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| Institute of BioMedical Informatics, National Yang Ming Chiao Tung University 國立陽明交通大學 生物醫學資訊研究所 |
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|
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|
Dr. Chun-Ying Wu
吳俊穎
|
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| dr.wu.taiwan@gmail.com | ||
| Students: | ||
| ● Microbiota and human diseases
● Health big data research ● Digestive cancer translational research ● Biomarkers and biochips |
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| Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University 國立台灣大學 生醫電子與資訊學研究所 |
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|
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|
Dr. Chung-Ping Chen
陳中平
|
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| cpchen@ntu.edu.tw | ||
|
Students:
|
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| ● Statistical Timing Analysis
● Circuit Simulation and Optimization ● Microprocessor Design |
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| Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University 國立台灣大學 生醫電子與資訊學研究所 |
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|
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|
Dr. Nien-Tsu Huang
黃念祖
|
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| nthuang@ntu.edu.tw | ||
| Students: | ||
| ● developing integrated electrical, optical and mechanical miniaturized fluidics and sensors for biological applications, such as cellular biology, drug screening, and disease diagnosis | ||
| Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University 國立台灣大學 生醫電子與資訊學研究所 |
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|
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|
Dr. Po-Ling Kuo
郭柏齡
|
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| poling@ntu.edu.tw | ||
| Students: | ||
| ● Biophysics
● Mechanobiology ● Biomechanics |
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| Graduate Institute of Physiology, National Taiwan University 國立台灣大學 生理學研究所 |
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|
|
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|
Dr. Liang-Chuan Lai
賴亮全
|
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| llai@ntu.edu.tw | ||
|
Students:
|
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| ● using microarray or next generation sequencing to explore the cancer genomics
● Investigation of regulatory mechanism of NDRG1 upon reoxygenation ● Regulation of transcription and metastasis of semaphorin family in lung cancer |
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| Institute of Health Data Analytics and Statistics, National Taiwan University 國立台灣大學 健康數據拓析統計研究所 |
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|
|
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|
Dr. Tzu-Pin Lu
盧子彬
|
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| tplu@ntu.edu.tw | ||
|
Students: Yu-Ching Hsu
|
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| ● Bioinformatics
● Microarray and next generation sequencing data analysis ● Computational Biology |
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| Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University 國立台灣大學 生醫電子與資訊學研究所 |
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|
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|
Dr. Yufeng Jane Tseng
曾宇鳳
|
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| yjtseng@csie.ntu.edu.tw | ||
| Students: | ||
| ● Computational Chemistry and Toxicology
● Metabolomics ● Bioinformatics ● Cheminformatics ● Health informatics |
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| Department of Biomechatronics Engineering, National Taiwan University 國立台灣大學 生物機電工程學系 |
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|
|
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|
Dr. Chien-Yu Chen
陳倩瑜
|
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| chienyuchen@ntu.edu.tw | ||
|
Students: |
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| ● Bioinformatics
● Data Mining ● Machine Learning |
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| Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University 國立台灣大學 生醫電子與資訊學研究所 |
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|
|
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|
Dr. Eric Y. Chuang
莊曜宇
|
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| chuangey@ntu.edu.tw | ||
| Students: Chayanika Goswami | ||
| ● Biochip Bioinformatics
● Next-Generation Sequencing ● Radiation Biology ● Cancer Biology ● Bioinformatics |
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| College of Medicine, National Taiwan University 國立台灣大學 醫學系 |
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|
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|
Dr. Wei-Zen Sun
孫維仁
|
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| wzsun@ntu.edu.tw | ||
| Students: | ||
| ● Pain medicine
● acupuncture and moxibustion ● anesthesiology |
||
| Institute of Biotechnology, National Taiwan University 國立台灣大學 生物科技研究所 |
||
|
|
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|
Dr. Mon-Hsun Tsai
蔡孟勳
|
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| motiont@gmail.com | ||
|
Students: |
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| ● Bioinformatics
● Cell Biology ● Microarray ● Radiation Biology |
||
| Institute of Molecular and Cellular Biology, National Taiwan University 國立台灣大學 分子與細胞生物學研究所 |
||
|
|
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|
Dr. Hsiao-Chun Huang
黃筱鈞
|
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| hsiaochun@ntu.edu.tw | ||
| Students: | ||
| ● Molecular Cell Biology
● Systems and Synthetic Biology ● Cell Division |
||
| Department of Life Science, National Taiwan University 國立台灣大學 生命科學系 |
||
|
|
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|
Dr. Hsueh-Fen Juan
阮雪芬
|
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| yukijuan@ntu.edu.tw | ||
|
Students: |
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| ● Genomics
● Bioinfomatics ● Proteomics |
||
| Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University 國立台灣大學 生醫電子與資訊學研究所 |
||
|
|
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|
Dr. An-Chi Wei
魏安祺
|
||
| acwei86@ntu.edu.tw | ||
|
Students: |
||
| ● System Biology
● Modeling and Simulation of biological systems ● Bioenergetics and Metabolism ● Mitochondria |
||
| The Graduate Institute of Medical Genomics and Proteomics, National Taiwan University 國立台灣大學 基因體暨蛋白體醫學研究所 |
||
|
|
||
|
Dr. Shu-Jui Hsu
許書睿
|
||
| jacobhsu@ntu.edu.tw | ||
| Students: | ||
| ● Human Genomics
● Statistical Genetics ● Bioinformatics ● Genome Medicine |
||
| Electrical Engineering Department, National Taiwan University 國立台灣大學 電機工程學系 |
||
|
|
||
|
Dr. Tzu-Yu (Joyce) Liu
劉子毓
|
||
| joyliu@ntu.edu.tw | ||
| Students: | ||
| ● Functional data analysis
● Transfer learning ● Multi-task learning ● Data fusion ● Generative model |
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